These diagrams should help you with the wiring of the dizzy...
As for the other questions, the haltech i've wired into a car i used the haltech loom and put the connectors on the haltech loom. It was a complete uncut one though, so it is a bit different from what you are trying to do.
Otherwise you can use the small port loom if you need to and then swap the ecu plugs over. I've also always soldered the wires and used conduit / heat sleave where it runs close to the engine